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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015933249.1_cds_XP_016479633.1_71154
CDS Infomation

[gene=LOC107800885] [db_xref=GeneID:107800885] [protein=protein high chlorophyll fluorescent 107-like isoform X2] [protein_id=XP_016479633.1] [location=complement(join(11538..12050,12312..12488,12635..12745,13308..13553,13681..13740,13845..14126))] [gbkey=CDS]
Sequence

ATGGGTAATATACGGAGAGCTAGAGAACTATTTGATGCTGCCACAGTTGCTGACAAGAAG
CATATTGCAGCCTGGCATGGTTGGGCAGTTTTAGAGCTGAAGCAAGGGAATATAAAAAAG
GCAAGAAATCTTCTTGGCAAAGGCCTCAAGTTTTGTGGAGGTAACGAGTACATATACCAA
ACTCTTGCACTCCTTGAAGCTAAAGCAAAACGATATGAAAGAGCCCGCTACTTGTTCAAA
CAGGCGACAAAGTGTAACCGAAAAAGTTGTGCTAGTTGGCTGGCATGGGCTCAACTAGAG
GCTCAGTTAGAGAATAATCGTGCTGCTAGGCAGCTATTCGAGAAAGCAGTTCAGGCCAGT
CCAAAAAATCGGTTTGCGTGGCACGTGTGGGGAGTTTTTGAAGCTAATCTTGAAAACATT
GACCAAGGAAGGAAACTTCTGACAATTGGGCATATGGTAAATCCTAGAGATCCTGTTCTT
CTCCAGTCACTTGCTTTGATAGAATACAAGCACTCCAGTGCCAACCTCGCACGAGTTTTA
TTCCGGAGGGCATCTGAAATGGATCCAAGGCATCAACCAGTTTGGATTGCTTGGGGTTGG
ATGGAGTGGAAAGAAGGTAACATTTCCACTGCTAGGGAACTATACCAGAGAGCTCTGTCG
ATCAATTCAACAACCGAAAGTGCTGCGCGCTGTCTTCAGGCTTGGGGTGTTTTGGAGCAA
AGAGCCGGAAATCTATCAGCTGCTCGAAGATTGTTTAGATCTTCTCTGAACATAAACTCT
CAGAGCTATATAACATGGATGACATGGGCAAATTTGGAGGAAGATCAAGGCAACTCCGTG
CGTGCAGAGGAAATTCGTAACCTCTACTTTCAGCAGCGTACTGAAGTTGTCGACGATGAG
TCATGGATTATGGGTTTCTTAGATGTCATTGATCCGGCGATTGATAGCATAAAGAGGCTC
TTGAATTTGGATCAGAACTCTTATTACAAGGTAAAGGAGTCTTCTAATACTATTGCTGCA
GACGACACTGATGGGAGCTCAGAAGAATCAACCGGCTCCTCCTCGACTAACATCAGCCAG
GAAGAATCAACCGGCTCCTCCTCGGCTAACATCAGCACAGAAGAATCAGCCGGTTCCTCC
TCATCCTCGGCTAACATCAGCACAGAAGAATCAGGCAGTTCCTCCTCGGCTAACATCAAG
GACAATAGCATAGATACAGGAAGCGGCTTTGATTTAGATGATTTTATCCGAGAAATGCTG
TCTTTGGACCCTTCAAAACTGGAAGTTCAGCTTACAACATCTCTCAAGGACCCTCCAAAG
ACTATCAGAACTGCTAGTGGGGTGTGGCGGCCGACGAGAAAAACTACCAGAACATCACAA
AACCTTTGA

Peptide Sequence

PEP ID

XP_016479633.1
PEP Infomation

PREDICTED: protein high chlorophyll fluorescent 107-like isoform X2 [Nicotiana tabacum]
Sequence

MGNIRRARELFDAATVADKKHIAAWHGWAVLELKQGNIKKARNLLGKGLKFCGGNEYIYQ
TLALLEAKAKRYERARYLFKQATKCNRKSCASWLAWAQLEAQLENNRAARQLFEKAVQAS
PKNRFAWHVWGVFEANLENIDQGRKLLTIGHMVNPRDPVLLQSLALIEYKHSSANLARVL
FRRASEMDPRHQPVWIAWGWMEWKEGNISTARELYQRALSINSTTESAARCLQAWGVLEQ
RAGNLSAARRLFRSSLNINSQSYITWMTWANLEEDQGNSVRAEEIRNLYFQQRTEVVDDE
SWIMGFLDVIDPAIDSIKRLLNLDQNSYYKVKESSNTIAADDTDGSSEESTGSSSTNISQ
EESTGSSSANISTEESAGSSSSSANISTEESGSSSSANIKDNSIDTGSGFDLDDFIREML
SLDPSKLEVQLTTSLKDPPKTIRTASGVWRPTRKTTRTSQNL

Transcript Sequence

Gene sequence data has not been registered.